EnhancerDB
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  3. rs116731991[chr12:52830706]
Enhancers that have rs116731991[chr12:52830706]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52827009 52839071 enh14730
Skin (Keratinocyte) Prostate (PC-3) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs116731991[chr12:52830706]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52829742 52830802 ZNF143 GTRD no Epithelial (MCF-7) 21547030
chr12 52830161 52830998 ZNF143 GTRD no Epithelial (MCF-7) 21547032
chr12 52830185 52830735 ZNF143 GTRD no Epithelial (MCF-7) 21547033
chr12 52830324 52830974 ZNF143 GTRD no Epithelial (MCF-7) 21547034
chr12 52830350 52830717 ZNF143 GTRD no Epithelial (MCF-7) 21547035
chr12 52830476 52830734 ZNF143 GTRD no Epithelial (MCF-7) 21547036
chr12 52830483 52830707 ZNF143 GTRD no Epithelial (MCF-7) 21547037
chr12 52830699 52830714 MEF2C JASPAR yes 120940703
chr12 52830700 52830715 MEF2A JASPAR yes 120940704
chr12 52830700 52830721 IRF1 JASPAR yes 120940705
chr12 52830702 52830707 MYB TRANSFAC yes 120940706
chr12 52830702 52830717 IRF9 JASPAR yes 120940707
chr12 52830703 52830717 IRF8 JASPAR yes 120940708
Genes associated with rs116731991[chr12:52830706], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More