EnhancerDB
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  3. rs116734341[chr17:40410832]
Enhancers that have rs116734341[chr17:40410832]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs116734341[chr17:40410832]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40410830 40410840 SREBF2 JASPAR yes 54290902
chr17 40410830 40410840 TBX21 JASPAR yes 54290903
chr17 40410830 40410841 TBX20 JASPAR yes 54290904
chr17 40410830 40410841 TBX2 JASPAR yes 54290905
chr17 40410830 40410843 EOMES JASPAR yes 54290906
chr17 40410831 40410839 MGA JASPAR yes 54290907
chr17 40410831 40410841 TBR1 JASPAR yes 54290908
Genes associated with rs116734341[chr17:40410832], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More