EnhancerDB
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  3. rs116738953[chr17:56460355]
Enhancers that have rs116738953[chr17:56460355]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56450725 56479661 enh4499
Bone Marrow (K562) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Liver (HepG2)
Transcript factors that have rs116738953[chr17:56460355]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56460347 56460356 VENTX JASPAR yes 55015903
chr17 56460347 56460357 GSX2 JASPAR yes 55015904
chr17 56460347 56460357 MNX1 JASPAR yes 55015905
chr17 56460347 56460358 HOXA10 JASPAR yes 55015906
chr17 56460348 56460356 BARX1 JASPAR yes 55015907
chr17 56460353 56460359 TBP TRANSFAC yes 55015908
Genes associated with rs116738953[chr17:56460355], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More