EnhancerDB
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  3. rs116758940[chr17:56472215]
Enhancers that have rs116758940[chr17:56472215]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56450725 56479661 enh4499
Bone Marrow (K562) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Liver (HepG2)
Transcript factors that have rs116758940[chr17:56472215]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56472202 56472222 RREB1 JASPAR yes 55017571
chr17 56472212 56472222 SP1 JASPAR yes 55017572
chr17 56472215 56472220 SP1 TRANSFAC yes 55017573
Genes associated with rs116758940[chr17:56472215], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More