EnhancerDB
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  3. rs116772159[chr2:27947752]
Enhancers that have rs116772159[chr2:27947752]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27941049 27963575 enh18376
Astrocyte Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs116772159[chr2:27947752]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27947734 27947755 IRF1 JASPAR yes 72585531
chr2 27947747 27947761 SPIC JASPAR yes 72585533
chr2 27947750 27947771 IRF1 JASPAR yes 72585534
chr2 27947751 27947772 IRF1 JASPAR yes 72585535
chr2 27947752 27947767 PRDM1 JASPAR yes 72585536
chr2 27947752 27947773 IRF1 JASPAR yes 72585537
Genes associated with rs116772159[chr2:27947752], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More