EnhancerDB
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  3. rs116788681[chr1:178027839]
Enhancers that have rs116788681[chr1:178027839]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178015665 178033840 enh12406
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs116788681[chr1:178027839]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178027819 178027840 IRF1 JASPAR yes 33390765
chr1 178027820 178027841 ZNF263 JASPAR yes 33390766
chr1 178027825 178027846 IRF1 JASPAR yes 33390768
chr1 178027827 178027842 PRDM1 JASPAR yes 33390769
chr1 178027832 178027850 SRF JASPAR yes 33390770
chr1 178027839 178027849 NFIA JASPAR yes 33390771
Genes associated with rs116788681[chr1:178027839], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More