EnhancerDB
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  3. rs116791234[chr1:21354424]
Enhancers that have rs116791234[chr1:21354424]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21337448 21356675 enh106
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116791234[chr1:21354424]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21354422 21354443 IRF1 JASPAR yes 27268926
chr1 21354424 21354432 GATA3 JASPAR yes 27268927
chr1 21354424 21354439 IRF9 JASPAR yes 27268928
Genes associated with rs116791234[chr1:21354424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More