EnhancerDB
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  3. rs116817127[chr2:26230271]
Enhancers that have rs116817127[chr2:26230271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26217845 26245475 enh18363
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116817127[chr2:26230271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26230265 26230275 HOXB2 JASPAR yes 72515724
chr2 26230265 26230275 HOXB3 JASPAR yes 72515725
chr2 26230265 26230275 MNX1 JASPAR yes 72515726
chr2 26230266 26230274 LBX1 JASPAR yes 72515727
chr2 26230266 26230274 PDX1 JASPAR yes 72515728
chr2 26230266 26230274 VAX1 JASPAR yes 72515729
chr2 26230266 26230274 VAX2 JASPAR yes 72515730
chr2 26230266 26230274 VSX1 JASPAR yes 72515731
chr2 26230266 26230274 VSX2 JASPAR yes 72515732
chr2 26230266 26230276 POU6F2 JASPAR yes 72515733
chr2 26230267 26230278 PHOX2A JASPAR yes 72515734
chr2 26230267 26230278 PROP1 JASPAR yes 72515735
Genes associated with rs116817127[chr2:26230271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More