EnhancerDB
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  3. rs116825828[chr3:128005180]
Enhancers that have rs116825828[chr3:128005180]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 127989345 128008467 enh20907
Prostate (PC-3) Epithelial (MCF-7) Large Intestine Ovary Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs116825828[chr3:128005180]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 128005175 128005186 E2F1 JASPAR yes 5582011
chr3 128005176 128005181 SP1 TRANSFAC yes 5582012
chr3 128005176 128005187 E2F4 JASPAR yes 5582013
chr3 128005176 128005187 E2F6 JASPAR yes 5582014
chr3 128005177 128005182 SP1 TRANSFAC yes 5582015
chr3 128005180 128005185 ETS2 TRANSFAC yes 5582016
Genes associated with rs116825828[chr3:128005180], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More