EnhancerDB
  1. Home
  2. SNP
  3. rs116827806[chr4:7877825]
Enhancers that have rs116827806[chr4:7877825]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 7872045 7899128 enh21351
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs116827806[chr4:7877825]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 7877796 7878249 CTCF UCSC Txn Factor no Conserved 108532031
chr4 7877805 7877826 IRF1 JASPAR yes 88138652
chr4 7877811 7877832 IRF1 JASPAR yes 88138657
Genes associated with rs116827806[chr4:7877825], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More