EnhancerDB
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  3. rs116828758[chr16:29271471]
Enhancers that have rs116828758[chr16:29271471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29265834 29287135 enh31760
Astrocyte Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116828758[chr16:29271471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29271166 29271586 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21701994
chr16 29271458 29273165 ZNF274 GTRD no Liver (HepG2) 21701995
chr16 29271460 29272796 ZBTB33 GTRD no Brain (SK-N-SH) 21701996
chr16 29271464 29271476 TFAP2A JASPAR yes 10254929
chr16 29271464 29271479 TFAP2C JASPAR yes 10254930
chr16 29271465 29271476 TFAP2A JASPAR yes 10254931
chr16 29271465 29271477 INSM1 JASPAR yes 10254932
chr16 29271466 29271475 TFAP2A JASPAR yes 10254933
Genes associated with rs116828758[chr16:29271471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More