EnhancerDB
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  3. rs116836125[chr1:52016528]
Enhancers that have rs116836125[chr1:52016528]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52012725 52027215 enh11846
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs116836125[chr1:52016528]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52016521 52016542 IRF1 JASPAR yes 28849157
chr1 52016523 52016528 GATA2 JASPAR yes 28849158
chr1 52016524 52016538 IRF7 JASPAR yes 28849159
chr1 52016525 52016540 PRDM1 JASPAR yes 28849160
chr1 52016525 52016540 STAT2 JASPAR yes 28849161
Genes associated with rs116836125[chr1:52016528], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More