EnhancerDB
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  3. rs116839153[chr17:62174002]
Enhancers that have rs116839153[chr17:62174002]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62157225 62175223 enh17290
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116839153[chr17:62174002]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62169690 62174645 ZNF274 GTRD no Bone Marrow (K562) 108282264
chr17 62169690 62174645 ZNF274 GTRD no Bone Marrow (K562) 108282265
chr17 62169718 62174465 ZNF274 GTRD no Bone Marrow (K562) 108282267
chr17 62173626 62174743 AR GTRD no Prostate (PC-3) 21778637
chr17 62173626 62174743 AR GTRD no Prostate (PC-3) 108282269
chr17 62173809 62174655 ZNF274 GTRD no Bone Marrow (K562) 108282270
chr17 62173998 62174003 GATA1 TRANSFAC yes 55277120
Genes associated with rs116839153[chr17:62174002], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More