EnhancerDB
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  3. rs116863613[chr17:62160017]
Enhancers that have rs116863613[chr17:62160017]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62157225 62175223 enh17290
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116863613[chr17:62160017]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62159246 62160224 KAP1 UCSC Txn Factor no Conserved 108282134
chr17 62159359 62160037 ZNF143 GTRD no Epithelial (MCF-7) 21778572
chr17 62159359 62160037 ZNF143 GTRD no Epithelial (MCF-7) 108282137
chr17 62159377 62160033 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108282139
chr17 62159391 62160112 TCF7L2 GTRD no Colon (HCT116) 21778574
chr17 62159391 62160112 TCF7L2 GTRD no Colon (HCT116) 108282140
chr17 62159411 62160036 ZNF143 GTRD no Epithelial (MCF-7) 21778577
chr17 62159411 62160036 ZNF143 GTRD no Epithelial (MCF-7) 108282143
chr17 62159445 62160021 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108282158
chr17 62159467 62160067 GATA3 UCSC Txn Factor no Conserved 108282165
chr17 62159498 62160028 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21778585
chr17 62159498 62160028 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108282172
chr17 62159501 62160077 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108282173
chr17 62159505 62160021 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21778587
chr17 62159505 62160021 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108282176
chr17 62159832 62166447 ZNF143 GTRD no Epithelial (MCF-7) 21778613
chr17 62159832 62166447 ZNF143 GTRD no Epithelial (MCF-7) 108282222
chr17 62160007 62160022 FOXA1 JASPAR yes 55275272
chr17 62160011 62160022 FOXA1 JASPAR yes 55275273
chr17 62160015 62160026 NFE2L2 JASPAR yes 55275274
Genes associated with rs116863613[chr17:62160017], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More