EnhancerDB
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  3. rs116879811[chr17:64544723]
Enhancers that have rs116879811[chr17:64544723]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 64532553 64550230 enh4536
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
chr17 64544411 64544774 vista25601
VISTA
Transcript factors that have rs116879811[chr17:64544723]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 64544517 64544901 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21781848
chr17 64544517 64544901 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108284964
chr17 64544588 64545212 ZNF274 GTRD no Liver (HepG2) 21781849
chr17 64544588 64545212 ZNF274 GTRD no Liver (HepG2) 108284965
chr17 64544588 64545212 ZNF274 GTRD no Liver (HepG2) 108284966
chr17 64544613 64545225 ZNF274 GTRD no Liver (HepG2) 21781850
chr17 64544613 64545225 ZNF274 GTRD no Liver (HepG2) 108284967
chr17 64544613 64545225 ZNF274 GTRD no Liver (HepG2) 108284968
chr17 64544651 64544835 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21781851
chr17 64544651 64544835 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108284969
chr17 64544657 64545187 ZNF274 GTRD no Bone Marrow (K562) 108284970
chr17 64544657 64545187 ZNF274 GTRD no Bone Marrow (K562) 108284971
chr17 64544667 64544897 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108284972
chr17 64544669 64545219 ZNF274 GTRD no Liver (HepG2) 21781852
chr17 64544669 64545219 ZNF274 GTRD no Liver (HepG2) 108284973
chr17 64544669 64545219 ZNF274 GTRD no Liver (HepG2) 108284974
chr17 64544718 64544734 SOX8 JASPAR yes 21277724
chr17 64544718 64544734 SOX8 JASPAR yes 55447354
Genes associated with rs116879811[chr17:64544723], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More