EnhancerDB
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  3. rs116880054[chr15:41090513]
Enhancers that have rs116880054[chr15:41090513]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 41072825 41093715 enh16067
Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs116880054[chr15:41090513]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 41090497 41090518 IRF1 JASPAR yes 22955667
chr15 41090501 41090516 PRDM1 JASPAR yes 22955668
chr15 41090503 41090524 IRF1 JASPAR yes 22955669
Genes associated with rs116880054[chr15:41090513], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More