EnhancerDB
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  3. rs116881973[chr17:55970275]
Enhancers that have rs116881973[chr17:55970275]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55962618 55979623 enh17245
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Adrenal Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs116881973[chr17:55970275]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55969742 55970352 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274559
chr17 55969742 55970352 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274560
chr17 55969774 55970430 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274561
chr17 55969774 55970430 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274562
chr17 55969787 55970307 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274564
chr17 55969862 55970442 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274583
chr17 55969862 55970442 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274584
chr17 55969894 55970334 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773787
chr17 55969894 55970334 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274606
chr17 55969903 55970443 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274611
chr17 55969903 55970443 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274612
chr17 55969944 55970380 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274627
chr17 55969944 55970380 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274628
chr17 55969980 55970516 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274634
chr17 55969980 55970516 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274635
chr17 55969985 55970641 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274636
chr17 55969985 55970641 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274637
chr17 55970118 55970694 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274639
chr17 55970132 55970732 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274640
chr17 55970134 55970674 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274641
chr17 55970145 55970815 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274642
chr17 55970146 55970522 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21773799
chr17 55970146 55970522 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108274643
chr17 55970183 55970727 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773800
chr17 55970183 55970727 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274644
chr17 55970195 55970811 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773801
chr17 55970195 55970811 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274645
chr17 55970259 55970539 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274646
chr17 55970260 55970796 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108274647
chr17 55970265 55970655 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773802
chr17 55970265 55970655 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274648
Genes associated with rs116881973[chr17:55970275], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More