EnhancerDB
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  3. rs116890020[chr15:45939289]
Enhancers that have rs116890020[chr15:45939289]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 45921685 45943627 enh16095
Liver Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs116890020[chr15:45939289]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 45939279 45939289 HOXA13 JASPAR yes 23144513
chr15 45939280 45939295 MEF2A JASPAR yes 23144514
chr15 45939281 45939293 MEF2A JASPAR yes 23144515
chr15 45939282 45939292 MEF2A JASPAR yes 23144516
chr15 45939287 45939300 POU3F3 JASPAR yes 23144517
chr15 45939287 45939301 POU1F1 JASPAR yes 23144518
chr15 45939288 45939300 POU3F2 JASPAR yes 23144519
Genes associated with rs116890020[chr15:45939289], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More