EnhancerDB
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  3. rs116909940[chr6:106259206]
Enhancers that have rs116909940[chr6:106259206]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 106226176 106267255 enh23455
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen
Transcript factors that have rs116909940[chr6:106259206]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 106259198 106259210 PKNOX1 JASPAR yes 103983976
chr6 106259199 106259206 USF2 TRANSFAC yes 103983977
chr6 106259201 106259206 USF2 TRANSFAC yes 103983978
Genes associated with rs116909940[chr6:106259206], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More