EnhancerDB
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  3. rs116924730[chr17:75417278]
Enhancers that have rs116924730[chr17:75417278]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75373666 75445575 enh4617
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 75417194 75417582 vista26117
VISTA
Transcript factors that have rs116924730[chr17:75417278]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75416882 75417639 ZNF274 GTRD no Liver (HepG2) 21790639
chr17 75416882 75417639 ZNF274 GTRD no Liver (HepG2) 108298992
chr17 75417120 75417462 ZNF274 GTRD no Liver (HepG2) 21790640
chr17 75417120 75417462 ZNF274 GTRD no Liver (HepG2) 108298993
chr17 75417138 75417519 ZNF274 GTRD no Liver (HepG2) 21790641
chr17 75417138 75417519 ZNF274 GTRD no Liver (HepG2) 108298994
chr17 75417153 75417505 ZNF274 GTRD no Liver (HepG2) 21790642
chr17 75417153 75417505 ZNF274 GTRD no Liver (HepG2) 108298995
chr17 75417245 75417601 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21790643
chr17 75417245 75417601 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108298996
chr17 75417266 75417526 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21790644
chr17 75417266 75417526 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108298997
chr17 75417266 75417710 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21790645
chr17 75417266 75417710 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108298998
chr17 75417272 75417284 E2F1 JASPAR yes 21303172
chr17 75417272 75417284 PROX1 JASPAR yes 21303173
chr17 75417272 75417284 E2F1 JASPAR yes 56080157
chr17 75417272 75417284 PROX1 JASPAR yes 56080158
chr17 75417273 75417533 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21790646
chr17 75417273 75417533 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108298999
chr17 75417275 75417289 PLAG1 JASPAR yes 21303174
chr17 75417275 75417289 PLAG1 JASPAR yes 56080159
Genes associated with rs116924730[chr17:75417278], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More