EnhancerDB
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  3. rs116929961[chr1:228076498]
Enhancers that have rs116929961[chr1:228076498]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228069592 228093895 enh12737
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung Stomach Placenta Breast Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs116929961[chr1:228076498]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228074795 228076498 ZNF274 GTRD no Blood (GM12878) 107876780
chr1 228074833 228076722 ZNF274 GTRD no Cervix (HeLa-S3) 21388285
chr1 228074833 228076722 ZNF274 GTRD no Cervix (HeLa-S3) 107876783
chr1 228074986 228076838 ZBTB33 GTRD no Lung (A549) 107876788
chr1 228075015 228076890 ZNF274 GTRD no Blood (GM12878) 107876791
chr1 228075046 228076642 ZNF274 GTRD no Bone Marrow (K562) 21388289
chr1 228075046 228076642 ZNF274 GTRD no Bone Marrow (K562) 107876794
chr1 228075160 228076627 ZBTB33 GTRD no Lung (A549) 107876801
chr1 228076455 228076696 ZNF274 GTRD no Bone Marrow (K562) 21388294
chr1 228076455 228076890 ZNF274 GTRD no Bone Marrow (K562) 21388295
chr1 228076497 228076506 SNAI2 JASPAR yes 35890901
chr1 228076497 228076507 SREBF2 JASPAR yes 35890902
Genes associated with rs116929961[chr1:228076498], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More