EnhancerDB
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  3. rs116941777[chr17:34235990]
Enhancers that have rs116941777[chr17:34235990]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 34213485 34236135 enh17119
Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs116941777[chr17:34235990]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 34234940 34236229 ZBTB33 GTRD no Brain (SK-N-SH) 21751136
chr17 34235152 34236324 ZNF143 GTRD no Epithelial (MCF-7) 21751137
chr17 34235236 34236027 ZNF143 GTRD no Epithelial (MCF-7) 21751138
chr17 34235269 34236072 ZNF143 GTRD no Epithelial (MCF-7) 21751139
chr17 34235272 34236117 ZNF143 GTRD no Epithelial (MCF-7) 21751140
chr17 34235290 34236220 ZNF143 GTRD no Epithelial (MCF-7) 21751142
chr17 34235297 34236034 ZBTB33 GTRD no Brain (SK-N-SH) 21751143
chr17 34235302 34236051 ZNF143 GTRD no Epithelial (MCF-7) 21751144
chr17 34235327 34236091 ZBTB33 GTRD no Brain (SK-N-SH) 21751145
chr17 34235348 34236083 ZBTB33 GTRD no Brain (SK-N-SH) 21751146
chr17 34235370 34236042 ZNF143 GTRD no Epithelial (MCF-7) 21751147
chr17 34235391 34236088 ZNF143 GTRD no Epithelial (MCF-7) 21751148
chr17 34235443 34236251 ZNF143 GTRD no Epithelial (MCF-7) 21751151
chr17 34235479 34236949 TEF1 GTRD no Bone (Osteoblast) 21751154
chr17 34235511 34236057 ZNF143 GTRD no Epithelial (MCF-7) 21751158
chr17 34235981 34235999 RARA JASPAR yes 54021741
chr17 34235984 34235990 ZNF354C JASPAR yes 54021742
chr17 34235988 34235997 JDP2 JASPAR yes 54021743
chr17 34235990 34236405 ZNF143 GTRD no Epithelial (MCF-7) 21751162
Genes associated with rs116941777[chr17:34235990], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More