EnhancerDB
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  3. rs116943819[chr17:60171533]
Enhancers that have rs116943819[chr17:60171533]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60161225 60181195 enh32257
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs116943819[chr17:60171533]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60170011 60171547 ZNF274 GTRD no Liver (HepG2) 21777692
chr17 60170089 60172461 ZNF274 GTRD no Liver (HepG2) 21777693
chr17 60170260 60172245 ZNF274 GTRD no Liver (HepG2) 21777695
chr17 60171135 60172183 ZNF274 GTRD no Liver (HepG2) 21777706
chr17 60171141 60172294 ZNF274 GTRD no Liver (HepG2) 21777708
chr17 60171293 60172103 ZNF274 GTRD no Liver (HepG2) 21777710
chr17 60171409 60172217 ZNF274 GTRD no Liver (HepG2) 21777712
chr17 60171423 60171799 SOX2 GTRD no Neural Stem Cells (H9) 21777713
chr17 60171448 60171881 SOX2 GTRD no Neural Stem Cells (H9) 21777714
chr17 60171474 60172487 ZNF274 GTRD no Liver (HepG2) 21777715
chr17 60171528 60171546 SRF JASPAR yes 55181109
chr17 60171530 60171546 SRF JASPAR yes 55181110
chr17 60171530 60172179 ZNF274 GTRD no Liver (HepG2) 21777716
Genes associated with rs116943819[chr17:60171533], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More