EnhancerDB
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  3. rs116962439[chr1:178923253]
Enhancers that have rs116962439[chr1:178923253]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178892945 178926835 enh769
Epithelial (MCF-7) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs116962439[chr1:178923253]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178923234 178923253 REST JASPAR yes 33457073
chr1 178923243 178923255 NHLH1 JASPAR yes 33457075
chr1 178923244 178923254 NHLH1 JASPAR yes 33457076
chr1 178923244 178923254 TFAP4 JASPAR yes 33457077
Genes associated with rs116962439[chr1:178923253], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More