EnhancerDB
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  3. rs116999413[chr16:89411633]
Enhancers that have rs116999413[chr16:89411633]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116999413[chr16:89411633]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89408636 89411957 ZNF274 GTRD no Blood (GM12878) 21738295
chr16 89408636 89411957 ZNF274 GTRD no Blood (GM12878) 21738296
chr16 89408636 89411957 ZNF274 GTRD no Blood (GM12878) 108225756
chr16 89410142 89411651 ZNF143 GTRD no Epithelial (MCF-7) 21738298
chr16 89410142 89411651 ZNF143 GTRD no Epithelial (MCF-7) 108225758
chr16 89410149 89411882 ZNF143 GTRD no Epithelial (MCF-7) 21738299
chr16 89410149 89411882 ZNF143 GTRD no Epithelial (MCF-7) 108225759
chr16 89410280 89411766 ZNF274 GTRD no Blood (GM12878) 21738302
chr16 89410280 89411766 ZNF274 GTRD no Blood (GM12878) 108225763
chr16 89410367 89411794 ZNF143 GTRD no Epithelial (MCF-7) 21738306
chr16 89410367 89411794 ZNF143 GTRD no Epithelial (MCF-7) 108225767
chr16 89410370 89411798 ZNF143 GTRD no Epithelial (MCF-7) 21738307
chr16 89410370 89411798 ZNF143 GTRD no Epithelial (MCF-7) 108225768
chr16 89410464 89411667 ZNF274 GTRD no Liver (HepG2) 21738311
chr16 89410464 89411667 ZNF274 GTRD no Liver (HepG2) 108225772
chr16 89410748 89411807 ZNF143 GTRD no Epithelial (MCF-7) 21738339
chr16 89410748 89411807 ZNF143 GTRD no Epithelial (MCF-7) 108225801
chr16 89411630 89411638 E2F1 JASPAR yes 12334106
Genes associated with rs116999413[chr16:89411633], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More