EnhancerDB
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  3. rs117053563[chr1:209584417]
Enhancers that have rs117053563[chr1:209584417]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs117053563[chr1:209584417]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209584415 209584423 BARX1 JASPAR yes 34973092
chr1 209584415 209584431 POU4F3 JASPAR yes 34973093
chr1 209584417 209584431 POU4F1 JASPAR yes 34973094
chr1 209584417 209584432 HNF1A JASPAR yes 34973095
Genes associated with rs117053563[chr1:209584417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More