EnhancerDB
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  3. rs117054138[chr17:25854347]
Enhancers that have rs117054138[chr17:25854347]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs117054138[chr17:25854347]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25854334 25854351 ESR1 JASPAR yes 53641215
chr17 25854340 25854358 ESR2 JASPAR yes 53641217
chr17 25854345 25854361 SOX8 JASPAR yes 53641218
Genes associated with rs117054138[chr17:25854347], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 26721661 26734215 - SLC46A1 ENSG00000076351.8 26734215 867314 Esophagus 0.192334 15570