EnhancerDB
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  3. rs11709778[chr3:11652034]
Enhancers that have rs11709778[chr3:11652034]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 11624865 11654035 enh7002
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Stomach Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Esophagus Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11709778[chr3:11652034]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 11652025 11652040 TFAP2A JASPAR yes 436382
chr3 11652027 11652042 ZIC3 JASPAR yes 436383
chr3 11652028 11652039 TFAP2A JASPAR yes 436384
chr3 11652028 11652039 TFAP2B JASPAR yes 436385
chr3 11652028 11652040 TFAP2A JASPAR yes 436386
chr3 11652028 11652040 TFAP2B JASPAR yes 436387
chr3 11652028 11652040 TFAP2C JASPAR yes 436388
chr3 11652029 11652038 TFAP2A JASPAR yes 436389
Genes associated with rs11709778[chr3:11652034], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More