EnhancerDB
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  3. rs117116839[chr17:55975360]
Enhancers that have rs117116839[chr17:55975360]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55962618 55979623 enh17245
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Adrenal Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs117116839[chr17:55975360]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55975346 55975365 PAX5 JASPAR yes 54996574
chr17 55975348 55975813 CTCF UCSC Txn Factor no Conserved 108274678
Genes associated with rs117116839[chr17:55975360], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 55938604 56032684 - CUEDC1 ENSG00000180891.8 56032684 0 Uterus 0.475564 16075