EnhancerDB
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  3. rs117129827[chr19:2525650]
Enhancers that have rs117129827[chr19:2525650]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117129827[chr19:2525650]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2523151 2525874 ZBTB33 GTRD no Lung (A549) 21835976
chr19 2523151 2525874 ZBTB33 GTRD no Lung (A549) 108360947
chr19 2523257 2525886 ZBTB33 GTRD no Lung (A549) 21835977
chr19 2523257 2525886 ZBTB33 GTRD no Lung (A549) 108360948
chr19 2523337 2525769 ZBTB33 GTRD no Lung (A549) 21835978
chr19 2523337 2525769 ZBTB33 GTRD no Lung (A549) 108360949
chr19 2523352 2525828 ZBTB33 GTRD no Lung (A549) 21835979
chr19 2523352 2525828 ZBTB33 GTRD no Lung (A549) 108360950
chr19 2523387 2525995 ZBTB33 GTRD no Lung (A549) 21835981
chr19 2523387 2525995 ZBTB33 GTRD no Lung (A549) 108360952
chr19 2523392 2525802 ZBTB33 GTRD no Lung (A549) 21835982
chr19 2523392 2525802 ZBTB33 GTRD no Lung (A549) 108360953
chr19 2523412 2526155 ZNF274 GTRD no Cervix (HeLa-S3) 21835983
chr19 2523412 2526155 ZNF274 GTRD no Cervix (HeLa-S3) 108360954
chr19 2523431 2526345 TCF7L2 GTRD no Colon (HCT116) 21835984
chr19 2523431 2526345 TCF7L2 GTRD no Colon (HCT116) 108360956
chr19 2523457 2525934 ZBTB33 GTRD no Lung (A549) 21835985
chr19 2523457 2525934 ZBTB33 GTRD no Lung (A549) 108360957
chr19 2523459 2526134 ZBTB33 GTRD no Lung (A549) 21835986
chr19 2523459 2526134 ZBTB33 GTRD no Lung (A549) 108360958
chr19 2523499 2526006 TCF7L2 GTRD no Colon (HCT116) 21835987
chr19 2523499 2526006 TCF7L2 GTRD no Colon (HCT116) 108360959
chr19 2524071 2525759 ZNF274 GTRD no Cervix (HeLa-S3) 21835993
chr19 2524071 2525759 ZNF274 GTRD no Cervix (HeLa-S3) 108360967
chr19 2524108 2525734 ZBTB33 GTRD no Lung (A549) 21835995
chr19 2524108 2525734 ZBTB33 GTRD no Lung (A549) 108360969
chr19 2524130 2526428 ZNF143 GTRD no Epithelial (MCF-7) 21835998
chr19 2524130 2526428 ZNF143 GTRD no Epithelial (MCF-7) 108360973
chr19 2524149 2525725 ZBTB33 GTRD no Lung (A549) 21836002
chr19 2524149 2525725 ZBTB33 GTRD no Lung (A549) 108360977
chr19 2524166 2525748 ZNF143 GTRD no Epithelial (MCF-7) 21836006
chr19 2524166 2525748 ZNF143 GTRD no Epithelial (MCF-7) 108360981
chr19 2524179 2525838 ZNF274 GTRD no Cervix (HeLa-S3) 21836007
chr19 2524179 2525838 ZNF274 GTRD no Cervix (HeLa-S3) 108360982
chr19 2524205 2525768 ZNF143 GTRD no Epithelial (MCF-7) 21836008
chr19 2524205 2525768 ZNF143 GTRD no Epithelial (MCF-7) 108360984
chr19 2524216 2525775 ZNF143 GTRD no Epithelial (MCF-7) 21836010
chr19 2524216 2525775 ZNF143 GTRD no Epithelial (MCF-7) 108360987
chr19 2524218 2525969 ZNF274 GTRD no Cervix (HeLa-S3) 21836011
chr19 2524218 2525969 ZNF274 GTRD no Cervix (HeLa-S3) 108360988
chr19 2524234 2525806 ZNF274 GTRD no Cervix (HeLa-S3) 21836012
chr19 2524234 2525806 ZNF274 GTRD no Cervix (HeLa-S3) 108360989
chr19 2524255 2525734 ZNF274 GTRD no Bone Marrow (K562) 21836015
chr19 2524255 2525734 ZNF274 GTRD no Bone Marrow (K562) 108360993
chr19 2524255 2525774 P63 GTRD no Skin (Keratinocyte) 108360994
chr19 2524326 2525962 ZNF143 GTRD no Epithelial (MCF-7) 21836026
chr19 2524326 2525962 ZNF143 GTRD no Epithelial (MCF-7) 108361007
chr19 2524358 2525677 ZNF274 GTRD no Liver (HepG2) 21836029
chr19 2524358 2525677 ZNF274 GTRD no Liver (HepG2) 108361010
chr19 2524364 2525946 ZNF274 GTRD no Cervix (HeLa-S3) 21836030
chr19 2524364 2525946 ZNF274 GTRD no Cervix (HeLa-S3) 108361011
chr19 2524365 2525899 TCF7L2 GTRD no Colon (HCT116) 21836031
chr19 2524365 2525899 TCF7L2 GTRD no Colon (HCT116) 108361012
chr19 2524402 2525965 ZNF143 GTRD no Epithelial (MCF-7) 21836035
chr19 2524402 2525965 ZNF143 GTRD no Epithelial (MCF-7) 108361017
chr19 2524421 2525750 TCF7L2 GTRD no Colon (HCT116) 21836037
chr19 2524421 2525750 TCF7L2 GTRD no Colon (HCT116) 108361019
chr19 2524430 2525703 ZNF143 GTRD no Epithelial (MCF-7) 21836038
chr19 2524430 2525703 ZNF143 GTRD no Epithelial (MCF-7) 108361020
chr19 2524456 2525661 P63 GTRD no Skin (Keratinocyte) 108361021
chr19 2524488 2525986 ZNF274 GTRD no Cervix (HeLa-S3) 21836043
chr19 2524488 2525986 ZNF274 GTRD no Cervix (HeLa-S3) 108361027
chr19 2524509 2525710 ZNF143 GTRD no Epithelial (MCF-7) 21836047
chr19 2524509 2525710 ZNF143 GTRD no Epithelial (MCF-7) 108361031
chr19 2524511 2525753 ZNF143 GTRD no Epithelial (MCF-7) 21836050
chr19 2524511 2525753 ZNF143 GTRD no Epithelial (MCF-7) 108361034
chr19 2524520 2525690 ZNF143 GTRD no Epithelial (MCF-7) 21836053
chr19 2524520 2525690 ZNF143 GTRD no Epithelial (MCF-7) 108361037
chr19 2524526 2525712 ZNF143 GTRD no Epithelial (MCF-7) 21836055
chr19 2524526 2525712 ZNF143 GTRD no Epithelial (MCF-7) 108361039
chr19 2524537 2525667 ZNF143 GTRD no Epithelial (MCF-7) 21836059
chr19 2524537 2525667 ZNF143 GTRD no Epithelial (MCF-7) 108361043
chr19 2524545 2525755 ZNF143 GTRD no Epithelial (MCF-7) 21836061
chr19 2524545 2525755 ZNF143 GTRD no Epithelial (MCF-7) 108361045
chr19 2524548 2525877 ZNF143 GTRD no Epithelial (MCF-7) 21836062
chr19 2524548 2525877 ZNF143 GTRD no Epithelial (MCF-7) 108361046
chr19 2524594 2525817 ZNF143 GTRD no Epithelial (MCF-7) 21836067
chr19 2524594 2525817 ZNF143 GTRD no Epithelial (MCF-7) 108361051
chr19 2524598 2525776 POLR2A UCSC Txn Factor no Conserved 108361052
chr19 2524610 2526132 TCF7L2 GTRD no Colon (HCT116) 21836069
chr19 2524610 2526132 TCF7L2 GTRD no Colon (HCT116) 108361055
chr19 2524637 2525884 ZNF274 GTRD no Bone Marrow (K562) 21836072
chr19 2524637 2525884 ZNF274 GTRD no Bone Marrow (K562) 108361058
chr19 2524638 2525727 ZNF274 GTRD no Blood (GM12878) 108361059
chr19 2524652 2525814 ZNF274 GTRD no Cervix (HeLa-S3) 21836076
chr19 2524652 2525814 ZNF274 GTRD no Cervix (HeLa-S3) 108361063
chr19 2524655 2525744 TCF7L2 GTRD no Colon (HCT116) 21836077
chr19 2524655 2525744 TCF7L2 GTRD no Colon (HCT116) 108361064
chr19 2524662 2525704 ZNF274 GTRD no Cervix (HeLa-S3) 21836080
chr19 2524662 2525704 ZNF274 GTRD no Cervix (HeLa-S3) 108361067
chr19 2524662 2525868 ZNF143 GTRD no Epithelial (MCF-7) 21836081
chr19 2524662 2525868 ZNF143 GTRD no Epithelial (MCF-7) 108361068
chr19 2524665 2525752 ZNF274 GTRD no Liver (HepG2) 21836083
chr19 2524665 2525752 ZNF274 GTRD no Liver (HepG2) 108361070
chr19 2524692 2526287 TCF7L2 GTRD no Colon (HCT116) 21836093
chr19 2524692 2526287 TCF7L2 GTRD no Colon (HCT116) 108361081
chr19 2524694 2525650 ZBTB33 GTRD no Lung (A549) 21836094
chr19 2524694 2525650 ZBTB33 GTRD no Lung (A549) 108361082
chr19 2524723 2525694 ZNF143 GTRD no Epithelial (MCF-7) 21836100
chr19 2524723 2525694 ZNF143 GTRD no Epithelial (MCF-7) 108361088
chr19 2524741 2526158 TCF7L2 GTRD no Colon (HCT116) 21836106
chr19 2524741 2526158 TCF7L2 GTRD no Colon (HCT116) 108361094
chr19 2524778 2525765 ZBTB33 GTRD no Lung (A549) 21836117
chr19 2524778 2525765 ZBTB33 GTRD no Lung (A549) 108361106
chr19 2524788 2525675 ZNF274 GTRD no Cervix (HeLa-S3) 21836124
chr19 2524788 2525675 ZNF274 GTRD no Cervix (HeLa-S3) 108361113
chr19 2524808 2525781 ZNF143 GTRD no Epithelial (MCF-7) 21836133
chr19 2524808 2525781 ZNF143 GTRD no Epithelial (MCF-7) 108361123
chr19 2524842 2526268 TCF7L2 GTRD no Colon (HCT116) 21836142
chr19 2524842 2526268 TCF7L2 GTRD no Colon (HCT116) 108361133
chr19 2525069 2525816 ZBTB33 GTRD no Lung (A549) 21836201
chr19 2525069 2525816 ZBTB33 GTRD no Lung (A549) 108361195
chr19 2525139 2525669 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21836206
chr19 2525139 2525669 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108361200
chr19 2525144 2525760 ZNF274 GTRD no Bone Marrow (K562) 21836207
chr19 2525144 2525760 ZNF274 GTRD no Bone Marrow (K562) 108361201
chr19 2525645 2525653 TBX15 JASPAR yes 112069099
chr19 2525646 2525651 SP1 TRANSFAC yes 112069100
chr19 2525648 2525660 ZBTB7A JASPAR yes 112069101
Genes associated with rs117129827[chr19:2525650], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More