EnhancerDB
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  3. rs117177120[chr16:1238875]
Enhancers that have rs117177120[chr16:1238875]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1228905 1244901 enh31664
Liver (HepG2) Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Pancreas Uterus Epithelial (MCF-7)
Transcript factors that have rs117177120[chr16:1238875]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1238471 1239288 REST UCSC Txn Factor no Conserved 108171298
chr16 1238471 1239288 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108171299
chr16 1238536 1239318 ZNF274 GTRD no Bone Marrow (K562) 108171300
chr16 1238560 1239220 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108171301
chr16 1238650 1239248 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108171302
chr16 1238652 1239215 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108171303
chr16 1238847 1239332 TCF7L2 GTRD no Colon (HCT116) 21684336
chr16 1238847 1239332 TCF7L2 GTRD no Colon (HCT116) 108171304
chr16 1238849 1239316 ZNF274 GTRD no Bone Marrow (K562) 108171305
chr16 1238861 1238879 MAFF JASPAR yes 9144187
chr16 1238863 1238878 MAFK JASPAR yes 9144188
chr16 1238863 1238884 MAFG JASPAR yes 9144189
chr16 1238868 1238886 MAFF JASPAR yes 9144190
chr16 1238869 1238880 NFE2L2 JASPAR yes 9144191
chr16 1238869 1238884 MAFK JASPAR yes 9144192
chr16 1238873 1238894 REST JASPAR yes 9144193
chr16 1238874 1238893 REST JASPAR yes 9144194
Genes associated with rs117177120[chr16:1238875], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 1203241 1271771 + CACNA1H ENSG00000196557.6 1203241 0 Thyroid 1.23718e-08 14379