EnhancerDB
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  3. rs1172133[chr1:205248370]
Enhancers that have rs1172133[chr1:205248370]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205243649 205259635 enh893
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Heart
Transcript factors that have rs1172133[chr1:205248370]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205246524 205250029 ZNF274 GTRD no Bone Marrow (K562) 21371215
chr1 205246593 205250269 ZNF274 GTRD no Cervix (HeLa-S3) 21371216
chr1 205247158 205248429 ZNF143 GTRD no Epithelial (MCF-7) 21371229
chr1 205247161 205248799 ZNF274 GTRD no Cervix (HeLa-S3) 21371231
chr1 205247337 205250086 ZNF143 GTRD no Epithelial (MCF-7) 21371235
chr1 205247390 205249048 ZNF274 GTRD no Cervix (HeLa-S3) 21371236
chr1 205247742 205250034 ZNF143 GTRD no Epithelial (MCF-7) 21371240
chr1 205247750 205248419 ZNF143 GTRD no Epithelial (MCF-7) 21371241
chr1 205248262 205248601 ZNF274 GTRD no Cervix (HeLa-S3) 21371242
chr1 205248354 205248375 IRF1 JASPAR yes 34750533
chr1 205248355 205248370 FOXP1 JASPAR yes 34750534
chr1 205248357 205248372 FOXP1 JASPAR yes 34750535
chr1 205248358 205248373 STAT2 JASPAR yes 34750536
chr1 205248359 205248374 FOXP1 JASPAR yes 34750537
chr1 205248359 205248380 IRF1 JASPAR yes 34750538
chr1 205248360 205248381 IRF1 JASPAR yes 34750539
chr1 205248361 205248373 FOXC2 JASPAR yes 34750540
chr1 205248361 205248381 RREB1 JASPAR yes 34750541
chr1 205248362 205248373 FOXP2 JASPAR yes 34750542
chr1 205248367 205248382 FOXP1 JASPAR yes 34750543
chr1 205248370 205248381 FOXP2 JASPAR yes 34750544
Genes associated with rs1172133[chr1:205248370], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More