EnhancerDB
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  3. rs117216285[chr19:2533906]
Enhancers that have rs117216285[chr19:2533906]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117216285[chr19:2533906]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2533894 2533906 FOXI1 JASPAR yes 112070655
chr19 2533905 2533916 FOS JASPAR yes 112070657
chr19 2533905 2533916 JUND JASPAR yes 112070658
chr19 2533905 2533916 NFE2 JASPAR yes 112070659
chr19 2533906 2533914 JUND TRANSFAC yes 112070660
chr19 2533906 2533915 JDP2 JASPAR yes 112070661
chr19 2533906 2533917 JUNB JASPAR yes 112070662
chr19 2533906 2533920 JUN JASPAR yes 112070663
Genes associated with rs117216285[chr19:2533906], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More