EnhancerDB
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  3. rs117217428[chr19:11055275]
Enhancers that have rs117217428[chr19:11055275]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11044165 11061272 enh17918
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs117217428[chr19:11055275]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11055268 11055282 GATA2 JASPAR yes 112447393
chr19 11055274 11055278 NFE TRANSFAC yes 112447394
chr19 11055274 11055279 GATA1 TRANSFAC yes 112447395
chr19 11055274 11055280 GATA3 JASPAR yes 112447396
chr19 11055275 11055290 FOXP1 JASPAR yes 112447397
Genes associated with rs117217428[chr19:11055275], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More