EnhancerDB
  1. Home
  2. SNP
  3. rs117255920[chr1:180500259]
Enhancers that have rs117255920[chr1:180500259]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180482964 180504974 enh12423
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs117255920[chr1:180500259]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180499334 180500439 P63 GTRD no Skin (Keratinocyte) 21353385
chr1 180499393 180501751 ZNF274 GTRD no Bone Marrow (K562) 21353386
chr1 180499451 180500514 P63 GTRD no Skin (Keratinocyte) 21353387
chr1 180499473 180500332 P63 GTRD no Skin (Keratinocyte) 21353388
chr1 180499490 180500418 P63 GTRD no Skin (Keratinocyte) 21353389
chr1 180499793 180500626 ZNF274 GTRD no Bone Marrow (K562) 21353392
chr1 180500079 180500609 ZNF274 GTRD no Liver (HepG2) 21353393
chr1 180500111 180500590 ZNF274 GTRD no Liver (HepG2) 21353394
chr1 180500114 180500483 ZNF274 GTRD no Liver (HepG2) 21353395
Genes associated with rs117255920[chr1:180500259], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More