EnhancerDB
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  3. rs117265539[chr1:16502236]
Enhancers that have rs117265539[chr1:16502236]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117265539[chr1:16502236]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16502197 16502793 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107802226
chr1 16502223 16502243 RREB1 JASPAR yes 27031376
chr1 16502224 16502244 RREB1 JASPAR yes 27031377
chr1 16502228 16502238 SP1 JASPAR yes 27031380
chr1 16502229 16502239 SP1 JASPAR yes 27031381
chr1 16502230 16502236 MAZ TRANSFAC yes 27031382
chr1 16502230 16502240 SP1 JASPAR yes 27031383
chr1 16502231 16502241 MZF1 JASPAR yes 27031384
chr1 16502231 16502241 SP1 JASPAR yes 27031385
chr1 16502231 16502241 ZNF740 JASPAR yes 27031386
chr1 16502232 16502242 SP1 JASPAR yes 27031387
chr1 16502232 16502242 ZNF740 JASPAR yes 27031388
chr1 16502234 16502244 ZNF740 JASPAR yes 27031389
Genes associated with rs117265539[chr1:16502236], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More