EnhancerDB
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  3. rs117275422[chr3:12504301]
Enhancers that have rs117275422[chr3:12504301]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 12476025 12515148 enh20341
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Stomach Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus Heart
chr3 12504126 12504446 vista39988
VISTA
Transcript factors that have rs117275422[chr3:12504301]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 12504296 12504312 ZNF143 JASPAR yes 483861
chr3 12504296 12504312 ZNF143 JASPAR yes 70938703
chr3 12504298 12504313 RUNX2 JASPAR yes 483862
chr3 12504298 12504313 RUNX2 JASPAR yes 70938704
chr3 12504301 12504313 GLI2 JASPAR yes 483863
chr3 12504301 12504313 GLI2 JASPAR yes 70938705
Genes associated with rs117275422[chr3:12504301], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More