EnhancerDB
  1. Home
  2. SNP
  3. rs117280285[chr12:50932554]
Enhancers that have rs117280285[chr12:50932554]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117280285[chr12:50932554]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50931879 50935788 ZNF274 GTRD no Bone Marrow (K562) 21545238
chr12 50931879 50935788 ZNF274 GTRD no Bone Marrow (K562) 108031422
chr12 50932270 50935799 ZNF274 GTRD no Liver (HepG2) 21545241
chr12 50932270 50935799 ZNF274 GTRD no Liver (HepG2) 108031425
chr12 50932389 50932885 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21545242
chr12 50932389 50932885 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108031426
chr12 50932417 50935869 ZNF274 GTRD no Liver (HepG2) 21545243
chr12 50932417 50935869 ZNF274 GTRD no Liver (HepG2) 108031427
chr12 50932550 50932563 POU3F3 JASPAR yes 120840454
chr12 50932551 50932562 FOXA1 JASPAR yes 120840455
chr12 50932551 50932566 FOXA1 JASPAR yes 120840456
chr12 50932552 50932559 NKX3-1 JASPAR yes 120840457
chr12 50932552 50932563 FOXB1 JASPAR yes 120840458
chr12 50932552 50932563 FOXC1 JASPAR yes 120840459
chr12 50932552 50932564 FOXC2 JASPAR yes 120840460
Genes associated with rs117280285[chr12:50932554], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More