EnhancerDB
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  3. rs117345396[chr17:78769855]
Enhancers that have rs117345396[chr17:78769855]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs117345396[chr17:78769855]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78769845 78769859 TLX1 JASPAR yes 56280823
chr17 78769846 78769860 TLX1 JASPAR yes 56280824
chr17 78769849 78769861 E2F1 JASPAR yes 56280825
Genes associated with rs117345396[chr17:78769855], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More