EnhancerDB
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  3. rs117356097[chr17:56416338]
Enhancers that have rs117356097[chr17:56416338]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56410845 56419415 enh4498
Liver (HepG2) Epithelial (MCF-7) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs117356097[chr17:56416338]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275032
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275033
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275034
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275035
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275036
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275037
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774005
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275067
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275068
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275069
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275070
chr17 56415974 56416430 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108275143
chr17 56416102 56416512 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774105
chr17 56416102 56416512 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275145
chr17 56416228 56416485 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774106
chr17 56416228 56416485 EBF1 UCSC Txn Factor no Conserved 108275146
chr17 56416228 56416485 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275147
chr17 56416247 56416971 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108275148
chr17 56416280 56416856 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108275149
chr17 56416289 56416725 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774107
chr17 56416289 56416725 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275150
chr17 56416304 56416828 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108275151
chr17 56416306 56416816 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108275152
chr17 56416322 56416702 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774108
chr17 56416327 56416348 IRF1 JASPAR yes 55013109
chr17 56416331 56416345 SPI1 JASPAR yes 55013110
Genes associated with rs117356097[chr17:56416338], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 56282803 56296966 - MKS1 ENSG00000011143.12 56296966 119372 Spleen 0.453203 16083