EnhancerDB
  1. Home
  2. SNP
  3. rs117388806[chr12:52602471]
Enhancers that have rs117388806[chr12:52602471]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs117388806[chr12:52602471]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52602455 52602473 ESR1 JASPAR yes 120928160
chr12 52602460 52602476 ZNF143 JASPAR yes 120928161
chr12 52602466 52602478 PBX1 JASPAR yes 120928162
Genes associated with rs117388806[chr12:52602471], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More