EnhancerDB
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  3. rs117393143[chr17:2852185]
Enhancers that have rs117393143[chr17:2852185]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2849745 2866995 enh4215
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs117393143[chr17:2852185]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2852178 2852186 E2F1 JASPAR yes 52788496
chr17 2852178 2852189 E2F1 JASPAR yes 52788497
chr17 2852180 2852193 TFAP2A JASPAR yes 52788498
chr17 2852180 2852193 TFAP2B JASPAR yes 52788499
chr17 2852180 2852193 TFAP2C JASPAR yes 52788500
Genes associated with rs117393143[chr17:2852185], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More