EnhancerDB
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  3. rs117408494[chr12:46957066]
Enhancers that have rs117408494[chr12:46957066]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46935165 46958895 enh14680
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs117408494[chr12:46957066]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46956503 46957153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542625
chr12 46956503 46957153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108028065
chr12 46956531 46957136 POLR2A UCSC Txn Factor no Conserved 108028066
chr12 46956617 46957073 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542632
chr12 46956617 46957073 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108028075
chr12 46956674 46957150 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542638
chr12 46956674 46957150 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108028082
chr12 46957056 46957066 NKX2-3 JASPAR yes 120638740
chr12 46957057 46957066 NKX3-2 JASPAR yes 120638742
Genes associated with rs117408494[chr12:46957066], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More