EnhancerDB
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  3. rs117483146[chr17:80450988]
Enhancers that have rs117483146[chr17:80450988]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80448407 80467804 enh4648
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs117483146[chr17:80450988]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80448031 80451023 TCF7L2 GTRD no Colon (HCT116) 21800291
chr17 80448905 80452854 TCF7L2 GTRD no Colon (HCT116) 21800299
chr17 80449531 80451615 ZNF274 GTRD no Cervix (HeLa-S3) 21800304
chr17 80450211 80451828 TCF7L2 GTRD no Colon (HCT116) 21800308
chr17 80450380 80451132 ZNF274 GTRD no Bone Marrow (K562) 21800309
chr17 80450501 80451005 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21800310
chr17 80450557 80452924 TCF7L2 GTRD no Colon (HCT116) 21800311
chr17 80450705 80451161 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21800316
chr17 80450870 80451542 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21800317
chr17 80450931 80451179 ZNF274 GTRD no Bone Marrow (K562) 21800318
chr17 80450983 80450999 ZNF143 JASPAR yes 56367162
chr17 80450988 80450992 YY1 TRANSFAC yes 56367163
Genes associated with rs117483146[chr17:80450988], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More