EnhancerDB
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  3. rs117501836[chr6:138089530]
Enhancers that have rs117501836[chr6:138089530]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 138080385 138107115 enh9377
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Uterus Thymus Stomach
chr6 138089315 138089719 vista53744
VISTA
Transcript factors that have rs117501836[chr6:138089530]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 138089305 138089609 RUNX3 UCSC Txn Factor no Conserved 108541853
chr6 138089524 138089540 POU4F2 JASPAR yes 70446076
chr6 138089524 138089540 POU4F3 JASPAR yes 70446077
chr6 138089524 138089540 POU4F2 JASPAR yes 105673596
chr6 138089524 138089540 POU4F3 JASPAR yes 105673597
chr6 138089526 138089530 YY1 TRANSFAC yes 70446078
chr6 138089526 138089530 YY1 TRANSFAC yes 105673598
chr6 138089526 138089540 POU4F1 JASPAR yes 70446079
chr6 138089526 138089540 POU4F1 JASPAR yes 105673599
Genes associated with rs117501836[chr6:138089530], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 137518621 137540586 - IFNGR1 ENSG00000027697.8 137540586 548944 Heart 0.36684 6989