EnhancerDB
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  3. rs117514450[chr17:78728090]
Enhancers that have rs117514450[chr17:78728090]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78718165 78742035 enh4636
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs117514450[chr17:78728090]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78721095 78730813 ZNF274 GTRD no Blood (GM12878) 21797104
chr17 78721095 78730813 ZNF274 GTRD no Blood (GM12878) 108307176
chr17 78721095 78730813 ZNF274 GTRD no Blood (GM12878) 108307177
chr17 78722023 78728349 ZNF274 GTRD no Blood (GM12878) 21797105
chr17 78722023 78728349 ZNF274 GTRD no Blood (GM12878) 108307178
chr17 78722023 78728349 ZNF274 GTRD no Blood (GM12878) 108307179
chr17 78728083 78728093 MAX JASPAR yes 56275414
chr17 78728083 78728094 USF2 JASPAR yes 56275415
chr17 78728084 78728094 BHLHE40 JASPAR yes 56275416
chr17 78728084 78728094 HEY1 JASPAR yes 56275417
chr17 78728084 78728094 MAX JASPAR yes 56275418
chr17 78728084 78728094 MNT JASPAR yes 56275419
chr17 78728084 78728094 SREBF2 JASPAR yes 56275420
chr17 78728084 78728094 TFE3 JASPAR yes 56275421
chr17 78728084 78728094 TFEB JASPAR yes 56275422
chr17 78728084 78728094 TFEC JASPAR yes 56275423
chr17 78728084 78728095 USF1 JASPAR yes 56275424
chr17 78728084 78728095 USF2 JASPAR yes 56275425
chr17 78728085 78728092 USF1 JASPAR yes 56275426
chr17 78728085 78728095 MAX JASPAR yes 56275427
chr17 78728086 78728091 MYC TRANSFAC yes 56275428
chr17 78728086 78728091 USF1 TRANSFAC yes 56275429
chr17 78728086 78728091 USF2 TRANSFAC yes 56275430
chr17 78728087 78728100 SMAD2 JASPAR yes 56275431
Genes associated with rs117514450[chr17:78728090], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More