EnhancerDB
  1. Home
  2. SNP
  3. rs117539603[chr1:206872305]
Enhancers that have rs117539603[chr1:206872305]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206857225 206902007 enh27440
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs117539603[chr1:206872305]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206872301 206872305 H4TF2 TRANSFAC yes 34818926
chr1 206872305 206872311 SOX10 JASPAR yes 34818927
Genes associated with rs117539603[chr1:206872305], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More