EnhancerDB
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  3. rs117539916[chr16:29278175]
Enhancers that have rs117539916[chr16:29278175]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29265834 29287135 enh31760
Astrocyte Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs117539916[chr16:29278175]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29277913 29278243 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108191388
chr16 29277918 29278238 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108191389
chr16 29277923 29278203 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108191390
chr16 29277949 29278229 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108191391
chr16 29277950 29278226 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108191392
chr16 29277961 29278221 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108191393
chr16 29277969 29278213 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108191394
chr16 29277978 29278191 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108191395
chr16 29278158 29278179 ZNF263 JASPAR yes 10255829
chr16 29278158 29278179 ZNF263 JASPAR yes 49363642
chr16 29278162 29278183 ZNF263 JASPAR yes 10255831
chr16 29278162 29278183 ZNF263 JASPAR yes 49363644
chr16 29278173 29278191 NR3C1 JASPAR yes 10255832
Genes associated with rs117539916[chr16:29278175], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More