EnhancerDB
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  3. rs117541935[chr1:153486235]
Enhancers that have rs117541935[chr1:153486235]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117541935[chr1:153486235]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153485640 153486443 ZBTB33 GTRD no Brain (SK-N-SH) 21339526
chr1 153485654 153486459 ZBTB33 GTRD no Brain (SK-N-SH) 21339527
chr1 153485712 153486371 ZBTB33 GTRD no Brain (SK-N-SH) 21339530
chr1 153485764 153486377 ZBTB33 GTRD no Brain (SK-N-SH) 21339532
chr1 153485788 153486454 ZBTB33 GTRD no Brain (SK-N-SH) 21339533
chr1 153485819 153486280 ZBTB33 GTRD no Brain (SK-N-SH) 21339534
chr1 153485857 153486272 ZBTB33 GTRD no Brain (SK-N-SH) 21339535
chr1 153486232 153486238 MZF1 JASPAR yes 32255313
chr1 153486232 153486245 TFAP2A JASPAR yes 32255314
Genes associated with rs117541935[chr1:153486235], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More