EnhancerDB
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  3. rs117542819[chr2:28861669]
Enhancers that have rs117542819[chr2:28861669]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs117542819[chr2:28861669]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28861665 28861679 SPIC JASPAR yes 72662548
chr2 28861666 28861679 ELF1 JASPAR yes 72662549
chr2 28861669 28861676 SPIB JASPAR yes 72662550
chr2 28861669 28861680 FLI1 JASPAR yes 72662551
Genes associated with rs117542819[chr2:28861669], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More